Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim34aQ99PP6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Gm5745-201ENSMUST00000183748 313 ntBASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34aQ99PP6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gm13823-201ENSMUST00000119930 345 ntBASIC18.42■□□□□ 0.54
Trim34aQ99PP6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gm27533-201ENSMUST00000183800 152 ntBASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gm9063-201ENSMUST00000223299 582 ntBASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Gm2423-201ENSMUST00000074863 733 ntBASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34aQ99PP6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Dancr-204ENSMUST00000132389 2347 ntBASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm5479-201ENSMUST00000160578 435 ntBASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm44344-201ENSMUST00000200287 129 ntBASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.41■□□□□ 0.54
Trim34aQ99PP6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms