Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf111Q99ML9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf111Q99ML9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Gm23547-201ENSMUST00000158210 271 ntBASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms