Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1b1Q99LU0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1b1Q99LU0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gm11780-201ENSMUST00000136880 516 ntBASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Gm27646-201ENSMUST00000183989 110 ntBASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp1b1Q99LU0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm25990-201ENSMUST00000102440 86 ntBASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chmp1b1Q99LU0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms