Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15□□□□□ -0.01
Cstf1Q99LC2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cstf1Q99LC2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cstf1Q99LC2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cstf1Q99LC2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Gm14767-201ENSMUST00000121559 586 ntBASIC14.98□□□□□ -0.01
Cstf1Q99LC2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.98□□□□□ -0.01
Cstf1Q99LC2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gm14928-201ENSMUST00000120198 477 ntBASIC14.97□□□□□ -0.01
Cstf1Q99LC2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Gm9063-201ENSMUST00000223299 582 ntBASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf1Q99LC2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms