Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm5566-201ENSMUST00000116118 459 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm5479-201ENSMUST00000160578 435 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm16215-201ENSMUST00000161990 637 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm9719-201ENSMUST00000162765 543 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm27838-201ENSMUST00000184829 128 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gm24543-201ENSMUST00000103867 82 ntBASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gm7488-201ENSMUST00000117148 684 ntBASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Syt7-204ENSMUST00000223586 1344 ntBASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd2Q99JR8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcd2Q99JR8 App-207ENSMUST00000227737 2827 ntBASIC15.08■□□□□ 0.01
Smarcd2Q99JR8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Smarcd2Q99JR8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcd2Q99JR8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Syt7-205ENSMUST00000224135 1557 ntBASIC15.08■□□□□ 0
Smarcd2Q99JR8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Gm44855-201ENSMUST00000205725 362 ntBASIC15.08■□□□□ 0
Smarcd2Q99JR8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd2Q99JR8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms