Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm27525-201ENSMUST00000184465 107 ntBASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Gm27300-201ENSMUST00000184085 97 ntBASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Gm27335-201ENSMUST00000184758 97 ntBASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdha3Q91Y16 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha3Q91Y16 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Gm11779-201ENSMUST00000118541 368 ntBASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Mir8117-201ENSMUST00000184773 107 ntBASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Celf4-206ENSMUST00000224553 1729 ntBASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha3Q91Y16 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms