Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.94■□□□□ 0.14
Pcdha9Q91Y11 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Gm16026-204ENSMUST00000162652 683 ntBASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Gm44492-201ENSMUST00000197012 141 ntBASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha9Q91Y11 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha9Q91Y11 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha9Q91Y11 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms