Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb22Q91XZ8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Gm9385-201ENSMUST00000117563 472 ntBASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb22Q91XZ8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.49■□□□□ 0.39
Pcdhb22Q91XZ8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Gm15427-201ENSMUST00000117288 531 ntBASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb22Q91XZ8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb22Q91XZ8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms