Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Pcdhb3Q91XZ7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.05■□□□□ 0
Pcdhb3Q91XZ7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb3Q91XZ7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb3Q91XZ7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb3Q91XZ7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Pcdhb3Q91XZ7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb3Q91XZ7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhb3Q91XZ7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb3Q91XZ7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb3Q91XZ7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms