Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Pcdhb5Q91XZ5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb5Q91XZ5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Gm27437-201ENSMUST00000183429 107 ntBASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb5Q91XZ5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb5Q91XZ5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Prob1-201ENSMUST00000097619 3021 ntBASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb5Q91XZ5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb5Q91XZ5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Gm5186-201ENSMUST00000218781 920 ntBASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb5Q91XZ5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms