Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d19Q91X43 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Gm43125-201ENSMUST00000201724 730 ntBASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d19Q91X43 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Gm15483-201ENSMUST00000120338 456 ntBASIC15.6■□□□□ 0.09
Sh3d19Q91X43 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.6■□□□□ 0.09
Sh3d19Q91X43 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3d19Q91X43 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d19Q91X43 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms