Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
H1fooQ8VIK3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gm7222-201ENSMUST00000117512 906 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gm18489-201ENSMUST00000172565 551 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gm17971-201ENSMUST00000190239 806 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gm37153-201ENSMUST00000193637 231 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H1fooQ8VIK3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Efs-202ENSMUST00000227037 2540 ntBASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Gm15173-201ENSMUST00000122049 433 ntBASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H1fooQ8VIK3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Gm7153-201ENSMUST00000117092 455 ntBASIC12.56□□□□□ -0.4
H1fooQ8VIK3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H1fooQ8VIK3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms