Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr1Q8VHP6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdhr1Q8VHP6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 App-207ENSMUST00000227737 2827 ntBASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Gm25948-201ENSMUST00000175334 112 ntBASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr1Q8VHP6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.66□□□□□ -0.06
Cdhr1Q8VHP6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 AA543401-201ENSMUST00000164248 1269 ntBASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdhr1Q8VHP6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Cdhr1Q8VHP6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdhr1Q8VHP6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdhr1Q8VHP6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms