Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Gm18733-201ENSMUST00000173950 856 ntBASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Top1mtQ8R4U6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Top1mtQ8R4U6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Top1mtQ8R4U6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Top1mtQ8R4U6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Gm13597-201ENSMUST00000121239 375 ntBASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Top1mtQ8R4U6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms