Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Nup85Q8R480 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.44■□□□□ 0.06
Nup85Q8R480 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nup85Q8R480 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.43■□□□□ 0.06
Nup85Q8R480 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.43■□□□□ 0.06
Nup85Q8R480 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nup85Q8R480 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nup85Q8R480 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nup85Q8R480 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.42■□□□□ 0.06
Nup85Q8R480 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Gm45167-201ENSMUST00000208007 322 ntBASIC15.42■□□□□ 0.06
Nup85Q8R480 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.42■□□□□ 0.06
Nup85Q8R480 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Nup85Q8R480 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Nup85Q8R480 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nup85Q8R480 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Gm9682-201ENSMUST00000197505 556 ntBASIC15.41■□□□□ 0.06
Nup85Q8R480 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup85Q8R480 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup85Q8R480 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.41■□□□□ 0.06
Nup85Q8R480 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.41■□□□□ 0.06
Nup85Q8R480 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nup85Q8R480 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms