Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cuedc1Q8R3V6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm15358-201ENSMUST00000119249 520 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm18489-201ENSMUST00000172565 551 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm27301-201ENSMUST00000184012 127 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm20949-201ENSMUST00000206478 952 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cuedc1Q8R3V6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cuedc1Q8R3V6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms