Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim29Q8R2Q0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim29Q8R2Q0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim29Q8R2Q0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim29Q8R2Q0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Mir5126-201ENSMUST00000175513 77 ntBASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim29Q8R2Q0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim29Q8R2Q0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms