Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.4■□□□□ 0.22
Sox30Q8CGW4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox30Q8CGW4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Gm8749-201ENSMUST00000117737 331 ntBASIC16.39■□□□□ 0.21
Sox30Q8CGW4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox30Q8CGW4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.38■□□□□ 0.21
Sox30Q8CGW4 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sox30Q8CGW4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms