Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Shisa4Q8CA71 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Gm18889-201ENSMUST00000174284 929 ntBASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa4Q8CA71 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Gm44335-201ENSMUST00000196879 141 ntBASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Gm44297-201ENSMUST00000198304 141 ntBASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Gm44346-201ENSMUST00000198851 141 ntBASIC17.35■□□□□ 0.37
Shisa4Q8CA71 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.35■□□□□ 0.37
Shisa4Q8CA71 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa4Q8CA71 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa4Q8CA71 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms