Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.9■□□□□ 0.78
Cps1Q8C196 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cps1Q8C196 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Mir1938-201ENSMUST00000158746 100 ntBASIC19.9■□□□□ 0.78
Cps1Q8C196 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.9■□□□□ 0.78
Cps1Q8C196 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.9■□□□□ 0.78
Cps1Q8C196 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Gm6007-201ENSMUST00000208170 823 ntBASIC19.9■□□□□ 0.78
Cps1Q8C196 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Cps1Q8C196 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.9■□□□□ 0.78
Cps1Q8C196 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cps1Q8C196 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cps1Q8C196 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cps1Q8C196 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cps1Q8C196 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cps1Q8C196 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.89■□□□□ 0.77
Cps1Q8C196 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.89■□□□□ 0.77
Cps1Q8C196 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.89■□□□□ 0.77
Cps1Q8C196 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cps1Q8C196 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.89■□□□□ 0.77
Cps1Q8C196 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cps1Q8C196 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cps1Q8C196 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cps1Q8C196 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.88■□□□□ 0.77
Cps1Q8C196 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cps1Q8C196 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Cps1Q8C196 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm5279-201ENSMUST00000199575 745 ntBASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm43630-201ENSMUST00000201550 776 ntBASIC19.88■□□□□ 0.77
Cps1Q8C196 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cps1Q8C196 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Cps1Q8C196 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.88■□□□□ 0.77
Cps1Q8C196 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cps1Q8C196 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.87■□□□□ 0.77
Cps1Q8C196 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.87■□□□□ 0.77
Cps1Q8C196 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.87■□□□□ 0.77
Cps1Q8C196 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.87■□□□□ 0.77
Cps1Q8C196 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cps1Q8C196 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cps1Q8C196 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.86■□□□□ 0.77
Cps1Q8C196 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.86■□□□□ 0.77
Cps1Q8C196 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cps1Q8C196 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Cps1Q8C196 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cps1Q8C196 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cps1Q8C196 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms