Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.05□□□□□ -0.16
Cpne1Q8C166 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne1Q8C166 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm14140-201ENSMUST00000119999 995 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm18246-201ENSMUST00000221023 728 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.04□□□□□ -0.16
Cpne1Q8C166 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpne1Q8C166 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.03□□□□□ -0.16
Cpne1Q8C166 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 AW822252-206ENSMUST00000208904 237 ntBASIC14.03□□□□□ -0.16
Cpne1Q8C166 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cpne1Q8C166 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cpne1Q8C166 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Cpne1Q8C166 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.02□□□□□ -0.17
Cpne1Q8C166 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Gm6443-201ENSMUST00000203599 874 ntBASIC14.02□□□□□ -0.17
Cpne1Q8C166 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne1Q8C166 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne1Q8C166 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cpne1Q8C166 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne1Q8C166 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne1Q8C166 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne1Q8C166 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne1Q8C166 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms