Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Mir1668-201ENSMUST00000184114 107 ntBASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smco3Q8BQM7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Gm8520-201ENSMUST00000186517 868 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Gm7367-201ENSMUST00000057611 492 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco3Q8BQM7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Mir5130-201ENSMUST00000175160 84 ntBASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Gm10812-201ENSMUST00000099864 546 ntBASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms