Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdhr3Q8BL00 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Gm7284-201ENSMUST00000131667 944 ntBASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Gm27357-201ENSMUST00000183754 135 ntBASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdhr3Q8BL00 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms