Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm4Q8BKA3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Srrm4Q8BKA3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm4Q8BKA3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Srrm4Q8BKA3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Srrm4Q8BKA3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.03□□□□□ -0.32
Srrm4Q8BKA3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Srrm4Q8BKA3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm12260-201ENSMUST00000122447 411 ntBASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srrm4Q8BKA3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Gm10499-201ENSMUST00000174094 934 ntBASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms