Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Gm43767-201ENSMUST00000198933 381 ntBASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Gm44771-201ENSMUST00000206975 626 ntBASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Gm5364-201ENSMUST00000216789 889 ntBASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4bQ8BGE6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Atg4bQ8BGE6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Atg4bQ8BGE6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Efs-202ENSMUST00000227037 2540 ntBASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Atg4bQ8BGE6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Atg4bQ8BGE6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms