Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrsam1Q80ZI6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Gm8097-201ENSMUST00000117903 829 ntBASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Gm15372-201ENSMUST00000120729 834 ntBASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Gm12350-201ENSMUST00000121208 462 ntBASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrsam1Q80ZI6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Rprl3-201ENSMUST00000157400 290 ntBASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm25406-201ENSMUST00000157599 105 ntBASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrsam1Q80ZI6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Gm24513-201ENSMUST00000174964 138 ntBASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Gm27397-201ENSMUST00000184997 107 ntBASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrsam1Q80ZI6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms