Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Gm6973-201ENSMUST00000117080 721 ntBASIC14.34□□□□□ -0.11
Vrk1Q80X41 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.34□□□□□ -0.11
Vrk1Q80X41 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Vrk1Q80X41 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.33□□□□□ -0.12
Vrk1Q80X41 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.33□□□□□ -0.12
Vrk1Q80X41 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.32□□□□□ -0.12
Vrk1Q80X41 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.32□□□□□ -0.12
Vrk1Q80X41 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.32□□□□□ -0.12
Vrk1Q80X41 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.32□□□□□ -0.12
Vrk1Q80X41 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.32□□□□□ -0.12
Vrk1Q80X41 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vrk1Q80X41 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms