Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox11Q7M6Y2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox11Q7M6Y2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox11Q7M6Y2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Gm6973-201ENSMUST00000117080 721 ntBASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Gm11424-201ENSMUST00000121929 829 ntBASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox11Q7M6Y2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Gm2810-201ENSMUST00000118681 990 ntBASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Gm27618-201ENSMUST00000183671 60 ntBASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Mir7684-201ENSMUST00000183858 60 ntBASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 App-207ENSMUST00000227737 2827 ntBASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox11Q7M6Y2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox11Q7M6Y2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms