Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtl3Q6P1Y1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Gm10576-201ENSMUST00000191927 825 ntBASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Gm44492-201ENSMUST00000197012 141 ntBASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtl3Q6P1Y1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gm15920-201ENSMUST00000118998 402 ntBASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gm45747-201ENSMUST00000212203 999 ntBASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtl3Q6P1Y1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Gm17271-201ENSMUST00000165535 355 ntBASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtl3Q6P1Y1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms