Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.76■□□□□ 0.11
Scube3Q66PY1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm43767-201ENSMUST00000198933 381 ntBASIC15.76■□□□□ 0.11
Scube3Q66PY1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm10154-201ENSMUST00000084445 354 ntBASIC15.76■□□□□ 0.11
Scube3Q66PY1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Scube3Q66PY1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.75■□□□□ 0.11
Scube3Q66PY1 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.75■□□□□ 0.11
Scube3Q66PY1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.75■□□□□ 0.11
Scube3Q66PY1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.75■□□□□ 0.11
Scube3Q66PY1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Gm6736-201ENSMUST00000166583 948 ntBASIC15.74■□□□□ 0.11
Scube3Q66PY1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.74■□□□□ 0.11
Scube3Q66PY1 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.74■□□□□ 0.11
Scube3Q66PY1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.74■□□□□ 0.11
Scube3Q66PY1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scube3Q66PY1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scube3Q66PY1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
Scube3Q66PY1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scube3Q66PY1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scube3Q66PY1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scube3Q66PY1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms