Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.1□□□□□ -0.15
Sox17Q61473 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sox17Q61473 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox17Q61473 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox17Q61473 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox17Q61473 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sox17Q61473 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox17Q61473 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox17Q61473 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox17Q61473 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.09□□□□□ -0.15
Sox17Q61473 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox17Q61473 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox17Q61473 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox17Q61473 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox17Q61473 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Sox17Q61473 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.09□□□□□ -0.15
Sox17Q61473 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.09□□□□□ -0.15
Sox17Q61473 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Matn2-206ENSMUST00000228570 2798 ntBASIC14.09□□□□□ -0.15
Sox17Q61473 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Sox17Q61473 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox17Q61473 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox17Q61473 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sox17Q61473 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sox17Q61473 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox17Q61473 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.08□□□□□ -0.15
Sox17Q61473 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Sox17Q61473 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sox17Q61473 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox17Q61473 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms