Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.86□□□□□ -0.35
Clns1aQ61189 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.86□□□□□ -0.35
Clns1aQ61189 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Gm9987-201ENSMUST00000069768 567 ntBASIC12.86□□□□□ -0.35
Clns1aQ61189 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.86□□□□□ -0.35
Clns1aQ61189 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm14722-201ENSMUST00000118943 689 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm13436-201ENSMUST00000120418 567 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clns1aQ61189 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.85□□□□□ -0.35
Clns1aQ61189 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clns1aQ61189 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clns1aQ61189 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clns1aQ61189 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms