Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm20949-201ENSMUST00000206478 952 ntBASIC17.21■□□□□ 0.35
Scnn1aQ61180 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.21■□□□□ 0.35
Scnn1aQ61180 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.21■□□□□ 0.35
Scnn1aQ61180 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Scnn1aQ61180 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scnn1aQ61180 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm27618-201ENSMUST00000183671 60 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm18766-201ENSMUST00000189811 808 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm2451-201ENSMUST00000199447 999 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm10290-201ENSMUST00000200451 999 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.2■□□□□ 0.34
Scnn1aQ61180 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scnn1aQ61180 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.19■□□□□ 0.34
Scnn1aQ61180 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scnn1aQ61180 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.18■□□□□ 0.34
Scnn1aQ61180 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm8749-201ENSMUST00000117737 331 ntBASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm13223-201ENSMUST00000118609 747 ntBASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Gm28630-201ENSMUST00000187806 498 ntBASIC17.18■□□□□ 0.34
Scnn1aQ61180 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms