Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.18□□□□□ -0.14
Ripk1Q60855 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ripk1Q60855 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ripk1Q60855 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ripk1Q60855 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Ripk1Q60855 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ripk1Q60855 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.17□□□□□ -0.14
Ripk1Q60855 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gm10499-201ENSMUST00000174094 934 ntBASIC14.17□□□□□ -0.14
Ripk1Q60855 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gm10060-201ENSMUST00000212002 111 ntBASIC14.17□□□□□ -0.14
Ripk1Q60855 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ripk1Q60855 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ripk1Q60855 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ripk1Q60855 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.16□□□□□ -0.14
Ripk1Q60855 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.16□□□□□ -0.14
Ripk1Q60855 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ripk1Q60855 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.16□□□□□ -0.14
Ripk1Q60855 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.16□□□□□ -0.14
Ripk1Q60855 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ripk1Q60855 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.16□□□□□ -0.14
Ripk1Q60855 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.15□□□□□ -0.14
Ripk1Q60855 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.15□□□□□ -0.14
Ripk1Q60855 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ripk1Q60855 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Ripk1Q60855 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ripk1Q60855 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ripk1Q60855 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ripk1Q60855 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms