Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm15808-201ENSMUST00000119046 604 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm17794-201ENSMUST00000220252 955 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Col12a1Q60847 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Mir1894-201ENSMUST00000122802 81 ntBASIC14.6□□□□□ -0.07
Col12a1Q60847 Gm24526-201ENSMUST00000082921 158 ntBASIC14.6□□□□□ -0.07
Col12a1Q60847 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.6□□□□□ -0.07
Col12a1Q60847 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col12a1Q60847 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col12a1Q60847 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Col12a1Q60847 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col12a1Q60847 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Gm22018-201ENSMUST00000104357 131 ntBASIC14.59□□□□□ -0.07
Col12a1Q60847 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.59□□□□□ -0.07
Col12a1Q60847 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.59□□□□□ -0.07
Col12a1Q60847 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.59□□□□□ -0.07
Col12a1Q60847 Gm37714-201ENSMUST00000194742 342 ntBASIC14.59□□□□□ -0.07
Col12a1Q60847 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Col12a1Q60847 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.59□□□□□ -0.07
Col12a1Q60847 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col12a1Q60847 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col12a1Q60847 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col12a1Q60847 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col12a1Q60847 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col12a1Q60847 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.58□□□□□ -0.07
Col12a1Q60847 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col12a1Q60847 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.58□□□□□ -0.07
Col12a1Q60847 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.58□□□□□ -0.08
Col12a1Q60847 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.58□□□□□ -0.08
Col12a1Q60847 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Mir7654-201ENSMUST00000185082 70 ntBASIC14.58□□□□□ -0.08
Col12a1Q60847 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col12a1Q60847 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col12a1Q60847 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms