Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Mir8098-201ENSMUST00000184011 137 ntBASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5d-4Q5R1F6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5d-4Q5R1F6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Gm13884-201ENSMUST00000118103 829 ntBASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5d-4Q5R1F6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5d-4Q5R1F6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5d-4Q5R1F6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav5d-4Q5R1F6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms