Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Gm18246-201ENSMUST00000221023 728 ntBASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Gm15590-201ENSMUST00000078419 552 ntBASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf20Q5DTM8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf20Q5DTM8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Efs-202ENSMUST00000227037 2540 ntBASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf20Q5DTM8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms