Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Gm10013-201ENSMUST00000106074 672 ntBASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.11□□□□□ -0.15
Trim40Q3UWA4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Gm18032-201ENSMUST00000222541 538 ntBASIC14.11□□□□□ -0.15
Trim40Q3UWA4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim40Q3UWA4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim40Q3UWA4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.09□□□□□ -0.15
Trim40Q3UWA4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim40Q3UWA4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Trim40Q3UWA4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim40Q3UWA4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms