Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cnga4Q3UW12 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Celf4-206ENSMUST00000224553 1729 ntBASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cnga4Q3UW12 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Gm13312-201ENSMUST00000119631 718 ntBASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cnga4Q3UW12 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm9013-201ENSMUST00000132939 882 ntBASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Grk6-207ENSMUST00000225925 2769 ntBASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.23■□□□□ 0.03
Cnga4Q3UW12 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms