Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.02□□□□□ -0.33
Q3U1D9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.02□□□□□ -0.33
Q3U1D9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Q3U1D9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.02□□□□□ -0.33
Q3U1D9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.02□□□□□ -0.33
Q3U1D9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.02□□□□□ -0.33
Q3U1D9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.02□□□□□ -0.33
Q3U1D9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.02□□□□□ -0.33
Q3U1D9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.02□□□□□ -0.33
Q3U1D9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.02□□□□□ -0.33
Q3U1D9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Q3U1D9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.02□□□□□ -0.33
Q3U1D9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.02□□□□□ -0.33
Q3U1D9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Q3U1D9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.02□□□□□ -0.33
Q3U1D9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q3U1D9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Gm25287-201ENSMUST00000103846 110 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Gm22918-201ENSMUST00000103855 110 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Gm7774-201ENSMUST00000200064 533 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Q3U1D9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.01□□□□□ -0.33
Q3U1D9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Q3U1D9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Q3U1D9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.01□□□□□ -0.33
Q3U1D9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q3U1D9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13□□□□□ -0.33
Q3U1D9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13□□□□□ -0.33
Q3U1D9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Q3U1D9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Q3U1D9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13□□□□□ -0.33
Q3U1D9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Q3U1D9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13□□□□□ -0.33
Q3U1D9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13□□□□□ -0.33
Q3U1D9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13□□□□□ -0.33
Q3U1D9 Gm43767-201ENSMUST00000198933 381 ntBASIC13□□□□□ -0.33
Q3U1D9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13□□□□□ -0.33
Q3U1D9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13□□□□□ -0.33
Q3U1D9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q3U1D9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms