Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctdnep1Q3TP92 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctdnep1Q3TP92 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Gm12008-201ENSMUST00000117791 755 ntBASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ctdnep1Q3TP92 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms