Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm42778-201ENSMUST00000199644 553 ntBASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.4□□□□□ -0.42
Trim63Q38HM4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trim63Q38HM4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim63Q38HM4 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.4□□□□□ -0.43
Trim63Q38HM4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim63Q38HM4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Reep4-203ENSMUST00000226563 1444 ntBASIC12.39□□□□□ -0.43
Trim63Q38HM4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Nespas-201ENSMUST00000143738 1083 ntBASIC12.39□□□□□ -0.43
Trim63Q38HM4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.39□□□□□ -0.43
Trim63Q38HM4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.39□□□□□ -0.43
Trim63Q38HM4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim63Q38HM4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Flg-201ENSMUST00000050758 1488 ntBASIC12.38□□□□□ -0.43
Trim63Q38HM4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim63Q38HM4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim63Q38HM4 Carlr-201ENSMUST00000181515 2574 ntBASIC12.37□□□□□ -0.43
Trim63Q38HM4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms