Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacna1aP97445 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacna1aP97445 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cacna1aP97445 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cacna1aP97445 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.83□□□□□ -0.2
Cacna1aP97445 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.83□□□□□ -0.2
Cacna1aP97445 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cacna1aP97445 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cacna1aP97445 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cacna1aP97445 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm15321-201ENSMUST00000121290 288 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm6745-201ENSMUST00000199216 526 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm7775-201ENSMUST00000218871 853 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm15483-201ENSMUST00000120338 456 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.82□□□□□ -0.2
Cacna1aP97445 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cacna1aP97445 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cacna1aP97445 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cacna1aP97445 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cacna1aP97445 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Gm45331-201ENSMUST00000209868 554 ntBASIC13.81□□□□□ -0.2
Cacna1aP97445 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.81□□□□□ -0.2
Cacna1aP97445 Gm23984-201ENSMUST00000157139 203 ntBASIC13.81□□□□□ -0.2
Cacna1aP97445 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cacna1aP97445 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.81□□□□□ -0.2
Cacna1aP97445 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cacna1aP97445 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms