Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Gm6912-201ENSMUST00000117218 544 ntBASIC18.77■□□□□ 0.6
Nkx2-3P97334 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Olfr286-202ENSMUST00000205305 969 ntBASIC18.77■□□□□ 0.6
Nkx2-3P97334 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.77■□□□□ 0.6
Nkx2-3P97334 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-3P97334 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-3P97334 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-3P97334 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Nkx2-3P97334 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-3P97334 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Gm24694-201ENSMUST00000180054 110 ntBASIC18.76■□□□□ 0.59
Nkx2-3P97334 Gm27663-201ENSMUST00000184839 110 ntBASIC18.76■□□□□ 0.59
Nkx2-3P97334 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx2-3P97334 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.75■□□□□ 0.59
Nkx2-3P97334 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-3P97334 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Gm46209-201ENSMUST00000217912 553 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.74■□□□□ 0.59
Nkx2-3P97334 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-3P97334 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms