Protein–RNA interactions for Protein: P81067

Irx3, Iroquois-class homeodomain protein IRX-3, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irx3P81067 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.95■□□□□ 0.62
Irx3P81067 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.95■□□□□ 0.62
Irx3P81067 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.95■□□□□ 0.62
Irx3P81067 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Irx3P81067 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Irx3P81067 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irx3P81067 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.94■□□□□ 0.62
Irx3P81067 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Gm14494-201ENSMUST00000118786 435 ntBASIC18.94■□□□□ 0.62
Irx3P81067 Gm14822-201ENSMUST00000122247 291 ntBASIC18.94■□□□□ 0.62
Irx3P81067 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Irx3P81067 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Irx3P81067 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.94■□□□□ 0.62
Irx3P81067 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
Irx3P81067 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Irx3P81067 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.94■□□□□ 0.62
Irx3P81067 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Irx3P81067 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Irx3P81067 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.94■□□□□ 0.62
Irx3P81067 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Irx3P81067 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.93■□□□□ 0.62
Irx3P81067 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Irx3P81067 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.93■□□□□ 0.62
Irx3P81067 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Gm8097-201ENSMUST00000117903 829 ntBASIC18.93■□□□□ 0.62
Irx3P81067 Gm6550-201ENSMUST00000187574 993 ntBASIC18.93■□□□□ 0.62
Irx3P81067 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.93■□□□□ 0.62
Irx3P81067 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.93■□□□□ 0.62
Irx3P81067 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Irx3P81067 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.93■□□□□ 0.62
Irx3P81067 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Irx3P81067 Rubie-203ENSMUST00000227803 2430 ntBASIC18.93■□□□□ 0.62
Irx3P81067 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irx3P81067 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Irx3P81067 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Irx3P81067 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.92■□□□□ 0.62
Irx3P81067 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Irx3P81067 Gm4995-201ENSMUST00000117247 432 ntBASIC18.92■□□□□ 0.62
Irx3P81067 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.92■□□□□ 0.62
Irx3P81067 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Irx3P81067 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.92■□□□□ 0.62
Irx3P81067 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.92■□□□□ 0.62
Irx3P81067 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.92■□□□□ 0.62
Irx3P81067 AV026068-213ENSMUST00000223675 1171 ntBASIC18.92■□□□□ 0.62
Irx3P81067 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Irx3P81067 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Irx3P81067 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms