Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm27628-201ENSMUST00000184911 107 ntBASIC12.51□□□□□ -0.41
Pdlim4P70271 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.51□□□□□ -0.41
Pdlim4P70271 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.51□□□□□ -0.41
Pdlim4P70271 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.5□□□□□ -0.41
Pdlim4P70271 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.5□□□□□ -0.41
Pdlim4P70271 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.5□□□□□ -0.41
Pdlim4P70271 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim4P70271 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim4P70271 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Gm6443-201ENSMUST00000203599 874 ntBASIC12.49□□□□□ -0.41
Pdlim4P70271 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pdlim4P70271 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim4P70271 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim4P70271 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.48□□□□□ -0.41
Pdlim4P70271 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim4P70271 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms