Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Hmgb1P63158 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmgb1P63158 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hmgb1P63158 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmgb1P63158 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Gm37153-201ENSMUST00000193637 231 ntBASIC16.52■□□□□ 0.24
Hmgb1P63158 Gm43347-201ENSMUST00000200226 580 ntBASIC16.52■□□□□ 0.24
Hmgb1P63158 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hmgb1P63158 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hmgb1P63158 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.52■□□□□ 0.23
Hmgb1P63158 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.52■□□□□ 0.23
Hmgb1P63158 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.52■□□□□ 0.23
Hmgb1P63158 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgb1P63158 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Gm25990-201ENSMUST00000102440 86 ntBASIC16.51■□□□□ 0.23
Hmgb1P63158 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Gm21362-201ENSMUST00000194272 928 ntBASIC16.51■□□□□ 0.23
Hmgb1P63158 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.51■□□□□ 0.23
Hmgb1P63158 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hmgb1P63158 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgb1P63158 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hmgb1P63158 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Gm27459-201ENSMUST00000184860 107 ntBASIC16.5■□□□□ 0.23
Hmgb1P63158 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.5■□□□□ 0.23
Hmgb1P63158 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Gm43767-201ENSMUST00000198933 381 ntBASIC16.5■□□□□ 0.23
Hmgb1P63158 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hmgb1P63158 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgb1P63158 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Gm7222-201ENSMUST00000117512 906 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Gm9682-201ENSMUST00000197505 556 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Gm34391-201ENSMUST00000203706 907 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.49■□□□□ 0.23
Hmgb1P63158 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmgb1P63158 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.49■□□□□ 0.23
Hmgb1P63158 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms