Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.17□□□□□ -0.3
Lsm6P62313 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Gm4899-201ENSMUST00000178708 719 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Lsm6P62313 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Lsm6P62313 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm6P62313 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Lsm6P62313 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.16□□□□□ -0.3
Lsm6P62313 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm6P62313 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.16□□□□□ -0.3
Lsm6P62313 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm6P62313 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm6P62313 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm6P62313 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm6P62313 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.15□□□□□ -0.3
Lsm6P62313 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm6P62313 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.15□□□□□ -0.3
Lsm6P62313 Mir5126-201ENSMUST00000175513 77 ntBASIC13.15□□□□□ -0.3
Lsm6P62313 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm6P62313 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Lsm6P62313 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.15□□□□□ -0.3
Lsm6P62313 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Lsm6P62313 Gm18246-201ENSMUST00000221023 728 ntBASIC13.15□□□□□ -0.3
Lsm6P62313 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm6P62313 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms