Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Cks1bP61025 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.74□□□□□ -0.69
Cks1bP61025 Gm12134-201ENSMUST00000122109 520 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Gm3375-201ENSMUST00000203929 796 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Cks1bP61025 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.74□□□□□ -0.69
Cks1bP61025 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1bP61025 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.73□□□□□ -0.69
Cks1bP61025 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Paupar-201ENSMUST00000194826 3482 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm715-201ENSMUST00000117865 831 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Gm11336-201ENSMUST00000118168 334 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.73□□□□□ -0.69
Cks1bP61025 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Gm29707-201ENSMUST00000196325 491 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Gm44450-201ENSMUST00000199528 114 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.73□□□□□ -0.69
Cks1bP61025 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cks1bP61025 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1bP61025 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1bP61025 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.72□□□□□ -0.69
Cks1bP61025 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.72□□□□□ -0.69
Cks1bP61025 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1bP61025 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1bP61025 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms