Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tpm1P58771 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.77■□□□□ 0.28
Tpm1P58771 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.77■□□□□ 0.28
Tpm1P58771 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Tpm1P58771 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpm1P58771 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm1P58771 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.77■□□□□ 0.27
Tpm1P58771 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm1P58771 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpm1P58771 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Tpm1P58771 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tpm1P58771 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gm11950-201ENSMUST00000121615 838 ntBASIC16.76■□□□□ 0.27
Tpm1P58771 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tpm1P58771 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.76■□□□□ 0.27
Tpm1P58771 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.76■□□□□ 0.27
Tpm1P58771 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tpm1P58771 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpm1P58771 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tpm1P58771 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Tpm1P58771 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tpm1P58771 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpm1P58771 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.74■□□□□ 0.27
Tpm1P58771 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tpm1P58771 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Tpm1P58771 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.74■□□□□ 0.27
Tpm1P58771 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Tpm1P58771 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tpm1P58771 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.74■□□□□ 0.27
Tpm1P58771 Rprl3-201ENSMUST00000157400 290 ntBASIC16.74■□□□□ 0.27
Tpm1P58771 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tpm1P58771 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.74■□□□□ 0.27
Tpm1P58771 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.74■□□□□ 0.27
Tpm1P58771 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.74■□□□□ 0.27
Tpm1P58771 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tpm1P58771 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Tpm1P58771 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms